BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB038A05SP1|AL430468
(175 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1300 330 4e-91
>3x_Contig1300
Length = 6589
Score = 330 bits (166), Expect = 4e-91
Identities = 169/170 (99%)
Strand = Plus / Plus
Query: 1 atgaaccgttatagtgccaccttacttgcagacacttatatgaaggtgaacggtggtcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1823 atgaaccgttatagtgccaccttacttgcagacacttatatgaaggtgaacggtggtcaa 1882
Query: 61 gctcagactttcagttacatttcggctgacagaggattcccatcaattccaagtggatac 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1883 gctcagactttcagttacatttcggctgacagaggattcccatcaattccaagtggatat 1942
Query: 121 attgattctaagagacaggccgaagaacacatttcccaatacgggaaaca 170
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1943 attgattctaagagacaggccgaagaacacatttcccaatacgggaaaca 1992
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 858
Number of Sequences: 1807
Number of extensions: 858
Number of successful extensions: 56
Number of sequences better than 1.0e-20: 1
length of query: 175
length of database: 10,358,551
effective HSP length: 15
effective length of query: 160
effective length of database: 10,331,446
effective search space: 1653031360
effective search space used: 1653031360
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 49 (98.0 bits)